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  "Description": "The goal of 'PlotFTIR' is to easily and quickly kick-start\nthe production of journal-quality Fourier Transform Infra-Red\n(FTIR) spectral plots in R using 'ggplot2'. The produced plots\ncan be published directly or further modified by 'ggplot2'\nfunctions. L'objectif de 'PlotFTIR' est de démarrer facilement\net rapidement la production des tracés spectraux de\nspectroscopie infrarouge à transformée de Fourier (IRTF) de\nqualité journal dans R à l'aide de 'ggplot2'. Les tracés\nproduits peuvent être publiés directement ou modifiés davantage\npar les fonctions 'ggplot2'.",
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    "normalize_raman",
    "normalize_spectra",
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    "read_raman",
    "recalculate_baseline",
    "rename_plot_sample_ids",
    "save_plot",
    "smooth_spectra",
    "subtract_scalar_value",
    "transmittance_to_absorbance",
    "zoom_in_on_range"
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      "title": "FTIR Bio-diesel data",
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        "data.frame"
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        "sample_id"
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      "table": true,
      "tojson": true
    },
    {
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      "class": [
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        "data.frame"
      ],
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        "absorbance",
        "sample_id"
      ],
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      "tojson": true
    }
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    {
      "page": "add_band",
      "title": "Add Band",
      "topics": [
        "add_band"
      ]
    },
    {
      "page": "add_subtract_scalar",
      "title": "Add or Subtract Scalar Value",
      "topics": [
        "add_scalar_value",
        "add_subtract_scalar",
        "subtract_scalar_value"
      ]
    },
    {
      "page": "add_wavenumber_marker",
      "title": "Add a Marker at a Wavenumber",
      "topics": [
        "add_wavenumber_marker"
      ]
    },
    {
      "page": "average_spectra",
      "title": "Average FTIR Spectra",
      "topics": [
        "average_spectra"
      ]
    },
    {
      "page": "baseline_correct",
      "title": "Correct Spectrum Baseline",
      "topics": [
        "baseline_correct"
      ]
    },
    {
      "page": "biodiesel",
      "title": "FTIR Bio-diesel data",
      "topics": [
        "biodiesel"
      ]
    },
    {
      "page": "check_ftir_data",
      "title": "Check FTIR Data",
      "topics": [
        "check_ftir_data"
      ]
    },
    {
      "page": "chemospec_to_plotftir",
      "title": "`ChemoSec` to `PlotFTIR` conversions",
      "topics": [
        "chemospec_to_plotftir"
      ]
    },
    {
      "page": "compress_low_energy",
      "title": "Compress Low-Energy Region",
      "topics": [
        "compress_low_energy"
      ]
    },
    {
      "page": "conversion",
      "title": "Convert Between Absorbance and Transmittance",
      "topics": [
        "absorbance_to_transmittance",
        "conversion",
        "transmittance_to_absorbance"
      ]
    },
    {
      "page": "find_ftir_peaks",
      "title": "Find FTIR Peaks",
      "topics": [
        "find_ftir_peaks"
      ]
    },
    {
      "page": "find_peak_maxima",
      "title": "Find Peak Maxima in Raman Spectra",
      "topics": [
        "find_peak_maxima"
      ]
    },
    {
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      "title": "Fitted Peaks Data.Frame",
      "topics": [
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    },
    {
      "page": "fit_peaks",
      "title": "Fit Peaks",
      "topics": [
        "fit_peaks"
      ]
    },
    {
      "page": "get_plot_sample_ids",
      "title": "Get Plot Sample IDs",
      "topics": [
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    {
      "page": "highlight_sample",
      "title": "Highlight Sample Spectra",
      "topics": [
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    },
    {
      "page": "ir_to_plotftir",
      "title": "Convert `ir` to `PlotFTIR` data format",
      "topics": [
        "ir_to_plotftir"
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    },
    {
      "page": "move_plot_legend",
      "title": "Move Plot Legend",
      "topics": [
        "move_plot_legend"
      ]
    },
    {
      "page": "normalize_raman",
      "title": "Normalize Raman Intensity Spectra",
      "topics": [
        "normalize_raman"
      ]
    },
    {
      "page": "normalize_spectra",
      "title": "Normalize FTIR spectra",
      "topics": [
        "normalize_spectra"
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    },
    {
      "page": "plot_components",
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    {
      "page": "plot_fit_ftir_peaks",
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      "topics": [
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      "topics": [
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    {
      "page": "plot_ftir",
      "title": "Plot FTIR Spectra Overlaid",
      "topics": [
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    },
    {
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      "title": "Plot Raman Spectra Overlaid",
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    {
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      "title": "Convert `PlotFTIR` data to `ChemoSpec` format",
      "topics": [
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    {
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    },
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      "title": "Print PlotFTIR Data",
      "topics": [
        "print.PlotFTIR_data"
      ]
    },
    {
      "page": "read_ftir",
      "title": "Read FTIR file",
      "topics": [
        "read_ftir"
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    },
    {
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      "title": "Read FTIR file",
      "topics": [
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    },
    {
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      "title": "Read Raman file",
      "topics": [
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    {
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    {
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    },
    {
      "page": "save_plot",
      "title": "Save FTIR Plot",
      "topics": [
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      ]
    },
    {
      "page": "smooth_spectra",
      "title": "Smooth Spectra Using Savitzky-Golay Filter",
      "topics": [
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    },
    {
      "page": "zoom_in_on_range",
      "title": "Zoom in on a spectral range",
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      "engine": "knitr::rmarkdown",
      "headings": [
        "Identifying Functional Groups in Biodiesel Spectra",
        "The Biodiesel Dataset",
        "Visualizing the Raw Spectrum",
        "Detecting Peaks Automatically",
        "How Peak Detection Works",
        "Fitting Peaks: Choosing a Model",
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        "References",
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        "L'ensemble de données Biodiesel",
        "Visualisation du Spectre Brut",
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        "Application de l'Ajustement de Pics à Plusieurs Échantillons",
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      "author": "Philip Bulsink",
      "engine": "knitr::rmarkdown",
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        "Introduction to PlotFTIR",
        "Installing PlotFTIR",
        "Reading Data",
        "Plotting",
        "Title & Subtitle",
        "Rename the Plotted Samples",
        "Compress Low Energy Region",
        "Limit Wavenumber Range",
        "Add Markers",
        "Putting It All Together",
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        "Conversion Between Transmittance and Absorbance",
        "Adding or Subtracting Numerical Values",
        "Averaging Multiple Spectra",
        "Shift Baselines",
        "Saving Spectral Plots",
        "Tracé de spectres IRTF",
        "Introduction à PlotFTIR",
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        "Lecture des données",
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        "Limiter les nombres d'ondes indiqués",
        "Ajouter des indicateurs",
        "Mise en place de l'ensemble",
        "Modifications mathématiques",
        "Conversion entre la transmittance et l'absorbance",
        "Ajout ou soustraction de valeurs numériques",
        "Calcul de la moyenne de plusieurs spectres",
        "Décaler les lignes de base",
        "Sauvegarde des tracés spectraux"
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      "created": "2024-09-17 12:07:50",
      "modified": "2026-09-18 18:08:13",
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